How can I build archetypal consensus motifs to represent different cluster motifs
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9 months ago

Hi, everyone.

I am wondering whether there is a tool can help to build archetypal consensus motifs to represent different cluster motifs.

For example, I calculate the all motif similarity and cluster the motif into 100 clusters. Then I want to use 100 motif model to represnt this 100 clusters.

I have read this article https://www.vierstra.org/resources/motif_clustering, and find it is a good resouce. But I find it is hard to use this pipeline for me and apply this methods in plants motif. So I am wondering whether someone can introduce some good tools.

Best wishes

Guandong Shang

motif • 204 views
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