MyTaxa prep doesn't work
1
0
Entering edit mode
2.3 years ago
tt • 0

Hello, Im triying to use MyTaxa to perform a AAI analysis, however, when I try to use de MyTaxa_prep I get the following error:

Input: ./mytaxa_prep.py -i test_proteĆ­n.faa -p output --prodigal=="./prodigal"

Output ./mytaxa_prep.py", line 94, in main if not prodigal_test or prodigal_test.count('not found') ==1: TypeError: argument should be integer or bytes-like object, not 'str'

How could I solve it? Anyone know an alternative to perform an AAI?

MyTaxa Python • 532 views
ADD COMMENT
0
Entering edit mode
2.3 years ago
Mensur Dlakic ★ 27k

There are some suggestions here to a similar problem.

ADD COMMENT

Login before adding your answer.

Traffic: 2835 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6