--soloFeatures Velocyto is presently not compatible with --soloType SmartSeq
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2.3 years ago
Dhanusha • 0

I have tried with the new version of STAR (2.7.9a) for my smart-seq2 dataset, but soloFeatures Velocyto is not working. Any idea which version of STAR is working for smart-seq2 with Velocyto? how to get mRNA spliced/unspliced/ambiguous quantification?

Smart-seq2 velocyto • 473 views
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