RNA-seq total read count & nucleotide relationship
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2.4 years ago
DBScan ▴ 300

To calculate the total number of reads per sample, is it correct to sum up the reads in all flowcells & lanes, and also sum up the reads for Read1 & Read2 when using paired-end sequencing?

Furthermore, unlike in DNA-Seq, the nucleotide content per cycle of A&T and G&C does not have to be equal because mRNA is single-stranded.

Are these statements correct?

rna-seq • 420 views
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