How to plot a mutation barplot of the SARS-CoV-2 genome?
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2.3 years ago
fhsantanna ▴ 610

I would like to plot a mutation barplot such as that below. Do you know any R or Python library for this purpose?

Initially, I thought to build a categorical heatmap, but it does not seem clever to me (I would need to generate a matrix of 30000 columns, the size of the SARS-CoV-2 genome).

enter image description here

seaborn python sars-cov-2 R • 549 views
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1
Entering edit mode
2.3 years ago
fhsantanna ▴ 610

I was able to do it using striplot from seaborn.

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