Filtering Clusterprofiler Result Object
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2.3 years ago
jms2520 ▴ 30

Hello!

I am running cluster profiler gseGO() function and there are a number of significant GO terms. When I print out the entire list of GO terms I see that many of the significant terms are related to inflammation and fall into similar pathways and categories but there are also unrelated terms. I would like to create a dotplot to visualize specifically these inflammation related terms in one graph. Is it possible to filter the GSEresult object for specific GO terms to put into one graph?

GSEA clusterProfiler • 343 views
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