Installing R-packages without sudo rights
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2.3 years ago
Alexander ▴ 220

I'm trying to install different libraries in my user folder on maestro server (folder can be riched by ~/.local) :

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("GenomicRanges")

this produces an error:

checking for curl-config... no
Cannot find curl-config
ERROR: configuration failed for package ‘RCurl’

I googled this and found that the following can help

sudo apt install libcurl4-openssl-dev

But since I'm on server I can't use sudo...

QUESTION: Is there any way to install those libraries without sudo rights ?

Thanks in advance!

server R • 1.8k views
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Are you able to use conda? Tried this already?

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Totally agree with Wayne, conda is the best choice for non-root users if you want to install something

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