Question

Minimum number of replicates for WGCNA analysis

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2.2 years ago

Appus • 0

Is it possible to do WGCNA analysis with 6 replicates ? (3 control and 3 treated)

WGCNA • 456 views

ADD COMMENT • link updated 2.2 years ago by andres.firrincieli 3.6k • written 2.2 years ago by Appus • 0

score 1 · Answer 1 · 2022-02-05

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2.2 years ago

andres.firrincieli 3.6k

You can't run WGCNA with 6 sample. The authors reccomend at least 20 samples and a minimum number of 15. Read the FAQ

ADD COMMENT • link 2.2 years ago by andres.firrincieli 3.6k