How can I download the VCF file of the 1000 genomes project with the population frequencies?

Question

[saulps]

I don't know where I can find a link to download the 1000 genomes project VCF file with the population frequencies and the human genome reference (GRCh38/hg38)

[abedkurdi10]

I don't think you can find the 1000 genome VCF file with population frequencies. You have to annotate the VCF yourself using ANNOVAR or VEP, which will add the population frequencies.

Answer 1

[trausch]

The phased VCF files have super-population (AFR, EUR, EAS, ...) allele frequencies (preprint).