How to update gff/gtf files after using Mauve Config Mover
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2.4 years ago

Hi everyone!!

I have two genomes and their gtf/gff file obtained from Ensembl. These genomes are related to each other but one of them is complete and other is at contig/scaffold level. I used Mauve Contig Mover (MCM) to rearrange the contigs in reference to the complete genome. Now I wish to merge the sequences inside the new file coming out of MCM and update alongside the gtf/gff files with new gene coordinates. Is their a tool with which we can achieve this?

Thanks in advance!!

assembly genome Mauve • 515 views

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