vg add introduces cycles to a directed acyclic graph
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2.2 years ago
ved_vyas ▴ 20

I am trying to add VCF to a graph (DAG) using ./vg add module. But once the process is completed, I found that there are cycles in the graph.

I used the following command: ./vg add -v file.vcf.gz graph.vg > new_graph.vg

"add" is a deprecated module in vg. Do the vg toolkit has any other module which does this job? If not, then how can I resolve this issue with add module ?

Thank You

vgteam vg graph variation • 347 views
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