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2.1 years ago
akamonto
•
0
Hi Everyone, I am new to circRNA analysis, and I could use some help with clarification.
In summary, I have have paired end mouse samples that I have aligned using STAR. I have followed instructions on CIRCexploler2 tutorial and I have successfully parsed and annotated my STAR aligned samples. In my annotation folder, I have circularRNA_known.txt files output for every sample. I am now interested in getting count matrix to use for downstream analysis like DEG. I could really use some help figure how to get the counts from here. Thank you.
