using ANNOVAR annotation clinvar database out wrong position
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2.1 years ago
gyhuang • 0

Hello Biostars,

I was trying to annotate the VCF using ANNOVAR,but I get a wrong out ,it seems my clinvar database is not sutibale

  1. bcftools_callCommand=call -m -v -o /project/plantform/20220316PCR/03.amplify/L2107973CFD7G5kxT1/L2107973CFD7G5kxT1.variation.vcf /project/plantform/20220316PCR/03.amplify/L2107973CFD7G5kxT1/L2107973CFD7G5kxT1.mpileup.vcf

enter image description here

clinvar ANNOVAR • 297 views
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