error running runTomTom() from memes package
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2.1 years ago
berlin • 0

I am constantly receiving error regarding runTomTom() function from memes packages.

As I am trying to do motif prediction and comparison using given function and package. Is there anyone had same problem using following code ?

library(memes)
library(magrittr)
example_motif <- create_motif("CCRAAAW")
database <- system.file("extdata", "flyFactorSurvey_cleaned.meme", package = "memes")
example_tomtom <- runTomTom(example_motif,database)

> Error: 'update_motifs' is not an exported object from 'namespace:universalmotif'

I have tried to reinstall the package and restarting the R. However the problem is remaining still.

Motif universalmotif motif comparison discovery memes installation • 500 views
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solved through R update and package reload Github

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