cd-hit-est obscure parameter -b
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2.0 years ago
biofalconch ★ 1.1k

Hi,

I was looking at the cd-hit-est documentation and I couldn't find a definition for the paramater -b other than it being "bandwidth of alignment", and having a value of 20. Looking through the documentation I couldn't find any insights of what it does.

Any ideas what this parameter does?

Cheers.

cd-hit-est • 575 views
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maybe this helps, not sure. https://drive5.com/usearch/cdhit_band.html

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