Hi all, Is it possible to compare the differentially expressed genes from different RNAseq datasets to see which experimental conditions produce the most significantly similar expression changes in genes? I have 3 individual experiments (2 different conditions in each):
1.2. M1 + compound
2.2. M2 + compound
3.2. M3 + compound
I want to see which experimental conditions produce the most statistically similar DEGs. If anyone could advise that would be great. Thank you!