SSPace | Search Pattern Terminated

Question

[mercadomarkcyril28]

Hello! this is my first time posting here.

I'm running a perl script but I keep on getting an error.

perl_script:

#!/usr/bin/perl 

perl ../SSPACE_Basic_v2.0.pl -l libraries.txt -s contigs_C3.fasta -x 1 -o 20 -k 5 -a 0.7 -m 30 -b C3_with_extensions

error:

Search pattern not terminated at ./sspace_script_C3_readable_v2.sh line 3.

How I could fix this? Thank you!

[Asaf]

The shebang (#!) line indicates that the code is perl code while you run shell code. Change it to #!/usr/bin/bash

[mercadomarkcyril28]

It works! Thank you.