Comparing FPKM/RPKM between two different datasets
0
0
Entering edit mode
22 months ago
Aleksandar • 0

Hello everyone :)!

Imagine I am looking at two papers: 1) The first one performs RNA-seq on HeLa cells and then reports gene expression in FPKM. 2) The second paper does the same, but for HEK cells.

Is there any reasonable way to compare expression of genes between these two papers/datasets. Is it as straightforward as to say that 500 FPKM of the actin gene in HeLa and 250 FPKM of the actin gene in HEK -> then HeLa cells have twice the amount of RNA transcripts of the actin gene? Perhaps, there is a completely other way of comparing these or maybe it's impossible?

Thanks for the information - it is of tremendous help :)!

FPKM comparison • 304 views
ADD COMMENT

Login before adding your answer.

Traffic: 1423 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6