Where are my feature count files going when I use this script:
featureCounts -a ncbi_dataset/data/GCA_002738495.1/genomic.gff \ -o Feature_counts.txt \ -p -s 2 -T 10 \ *_sorted.bam
It's running but can't find the file...no feature_counts.txt folder or cd?
Are they in these folders? I thought these folders were just the sam to bam conversion ones.