How to remove some samples from GSE dataset?
0
0
Entering edit mode
15 days ago

Hi all, There are 30 samples in my GSE dataset I want to remove some of them but I don know how

Here is me script

series <- "GSE9476"
platform <- "GPL96"
gset <- getGEO(series, GSEMatrix =TRUE, AnnotGPL = TRUE, destdir = "Data/")
if (length(gset) > 1) idx <- grep(platform, attr(gset, "names")) else idx <- 1
gset <- gset[[idx]]

Thanks for any help

GEOquery GSE • 173 views
ADD COMMENT
1
Entering edit mode
gset[,"your samples"]
ADD REPLY
0
Entering edit mode

Thank you so much.

ADD REPLY

Login before adding your answer.

Traffic: 1949 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6