Is there a tutorial/demo on single cell nuclei-seq (snRNA-seq or sNuc-seq) downstream analysis? I see lots of scRNA-seq when trying to google it but not much on snRNA-seq... I assume it's not too different from scRNA-seq analysis but was wondering what couple flags I should change to analyze. The data I'm trying to analyze is 10x pbmc data.
Any help is much appreciated, thank you.