Differential expression of small RNAs from smallRNAseq datasets
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2.2 years ago
Aiswarya ▴ 10

Hai,

I want to look at the differential expressions of small noncoding RNAs (specifically piRNAs) from small RNA-Seq datasets. I have found a few papers on those, but they are all slightly different in their methods. I was wondering if there is a standard pipeline suitable for this type of analysis. I would appreciate any advice.

Thanks in advance

RNA smallRNAseq small sequencing Expression pipeline Differential • 513 views
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I'm not sure about noncoding RNAs but maybe it could be a good start to have a look at this pipeline: https://nf-co.re/smrnaseq

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