SeuratObject to CellChatObject
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Entering edit mode
9 weeks ago
Anst ▴ 30

Hello!

I am trying to convert seurat object to cellchat one using

cellchat <- createCellChat(object = seurat, meta = seurat@meta.data, group.by = "labels")

It runs with the error Error: No images present in this Seurat object. I check my seurat object, and it does not have anything in its image field. (but I computed PCA, UMAP and all the preprocessing images)

So, the question is how to insert something in this field, or is there another way of converting seurat to cellchat?

Thanks!