Whole Genome Bisulfite Sequencing file types / Epigenetics

Question

[andreasstuermer]

Hi everyone!

I was hoping to find methylation sequences from Whole Genome Bisulfite Sequencing in the following format

Chromosome number - position - Methylation probability - coverage

But I am not sure which file format.

I checked

.bigwig: nope

.bed: looks a little more like it

However, my closest result was .bed file.

Maybe someone here has insight, fow which I would be extremely grateful!

[ATpoint]

Do you mean published data or do you have data at hand and are in need of a preprocessing pipeline?

[andreasstuermer]

from published data, sorry I forgot to write that