Entering edit mode
3 months ago
bioinfo ▴ 60
I am trying to download some files from SRA to perform alignment. One of the samples is https://www.ncbi.nlm.nih.gov/sra?term=SRX3013871 and it consists of two SRR runs. Do I need to merge the files once I have downloaded them?
Thank you. I am planning to run FASTQC and then kallisto for allignment. I was thinking of merging the reads but I wanted to be sure.