Help with MACS2 installation errors
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Entering edit mode
14 months ago
shanshan • 0

Hi, I am trying to install MACS2 in server. I already installing Anaconda with python3 and successfully installed MACS3 with

> pip install MACS3

However, when I trying to install MACS2 with same pip command it failed.

   (base) wkq953@porus01:~> pip install MACS2 --user
Collecting MACS2
  Using cached MACS2-2.2.7.1.tar.gz (2.1 MB)
  Installing build dependencies ... done
  Getting requirements to build wheel ... done
  Preparing metadata (pyproject.toml) ... error
  error: subprocess-exited-with-error

  × Preparing metadata (pyproject.toml) did not run successfully.
  │ exit code: 1
  ╰─> [4 lines of output]
      Requirement already satisfied: numpy>=1.17 in /tmp/pip-build-env-y6f5fk10/overlay/lib/python3.7/site-packages (1.21.6)
      error in MACS2 setup command: 'install_requires' must be a string or list of strings containing valid project/version requirement specifiers; Expected end or semicolon (after name and no valid version specifier)
          numpy>=>=1.17
               ^
      [end of output]

  note: This error originates from a subprocess, and is likely not a problem with pip.
error: metadata-generation-failed

× Encountered error while generating package metadata.
╰─> See above for output.

note: This is an issue with the package mentioned above, not pip.
hint: See above for details.

Thanks for your time and suggestions:)

pythom pip macs2 • 1.6k views
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Entering edit mode
14 months ago

Hi, I had the same problem and found this post helpful: Macs2 installation error #101

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