Deleted:Jellyfish Output
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13 months ago
yas ▴ 20

Hi, I used the command below to count the k-mer in a genome.

jellyfish count -m 3 -s 5M -L 1 B_amyloliquefaciens_CIAD-IB72.fna -o 3mers_jellyfish_output/B_amyloliquefaciens_CIAD-IB72_3.jf --text

and here is a part of the output that I get:

jellyfish output

I want my output to only include the k-mers and their count like this:

desired output

Does anyone knows how can I modify the command that I used to get the output that I want?

jellyfish • 655 views
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