Deleted:SNP ID (rsID) to Chr no. and Position
0
0
Entering edit mode
9 weeks ago
Jewahir • 0

Hi,

I have SNP arrays with rs ID, log R and BAF values, but I don't have the ID's chr. number and position. The platform that were used are:

GPL6433 Illumina HumanHap550 Genotyping BeadChip v1
GPL6434 Illumina HumanHap550 Genotyping BeadChip v3
GPL6982 Illumina HumanHap550-Duov3 Genotyping BeadChip (HumanHap550-2v3_B)
GPL8887 Illumina Human610-Quad v1.0 BeadChip
GPL18900    HumanOmniExpress-12v1 BeadChip

In GEO, you can find a Data table with rsID, chr number, position and more, but some of these tables are 'build' by hg18, and the SNP arrays I have are 'build' by hg19. You can say that I am trying to recreate the Data table but for hg19. I don't know if this is possible, so any help is appreciated

Thank you,
Jo

Annotation • 219 views
ADD COMMENT
This thread is not open. No new answers may be added
Traffic: 1644 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6