Creating CIBERSORTx signature matrix
0
0
Entering edit mode
11 months ago

Hi all, I want to acknowledge that there are several discussions on Biostars regarding how to build a signature matrix or how to normalize datasets for CIBERSORTx. Nevertheless I would still appreciate some clarification on what I am trying to acheive.

I am trying to build a signature matrix from the single cell data matrix file found on this GEO database page (https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE157640). Below is a screenshot of what the data look like. enter image description here

I would greatly appreciate if someone could point me in the right direction.

CIBERSORTx • 373 views
ADD COMMENT

Login before adding your answer.

Traffic: 2104 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6