Merge more than 150 Seurat objects together for further analysis

0

Entering edit mode

10 months ago

Andy ▴ 120

Hello,

I encountered a problem to merge more than 150 Seurat objects together. I was use merge_seurat_list and merge function before, but they seemed to not working anymore. I am wondering if you guys could offer me some suggestions?

Thanks Andy

seurat objects merge • 946 views

ADD COMMENT • link 10 months ago by Andy ▴ 120

0

Entering edit mode

Please follow up here Merge really large amount of Seurat objects rather than opening near-identical questions. Also, why does something not work, show code and errors.

ADD REPLY • link 10 months ago by ATpoint 82k

0

Entering edit mode

Yes, I was think the original answer is working. However, it is not. Since I encountered exact same questions. I am not sure how to trouble shoot my error.

My Seurat objects include RDS file, and normal 10x data. May be due to this? I am not sure.

ADD REPLY • link 10 months ago by Andy ▴ 120

Login before adding your answer.