Utilizing PON-P2 for vcf annotation
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2.2 years ago

I have done a lot of investigation into both the VEP plugin and the standalone api script provided for PON-P2, and I am beginning to suspect that the server is no longer functional. Has anybody used it recently or is able to confirm the status of the PON-P2 database?

annotation vcf PON-P2 api • 708 views
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Can you clarify which PON-P2 database you are referring to? http://structure.bmc.lu.se/PON-P2/ seems to be up and available. There is some wording on their API page about changes but it is not clear if that is a recent change.

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That is the one I was referring to, I have ran a few different files through their code, and it completes without error, but all of the resulting files are empty, and I believe the server responses are as well. I don't see any functional errors reading through the code so I am a bit stuck.

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