Quality control ATAC-seq, using plotFingerprint deepTools
0
0
Entering edit mode
22 months ago
Chris ▴ 360

Hi all,

I am not sure if wf sample has technical issue. Would you please have a comment? Thank you so much!

plotFingerprint  -b *.bam --labels mf wf --minMappingQuality 30 --skipZeros -T "Fingerprints of different samples"  --plotFile fingerprints.png --outRawCounts fingerprints.tab

enter image description here

deeptools • 532 views
ADD COMMENT

Login before adding your answer.

Traffic: 3638 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6