I have an RNA-seq dataset that I wish to compare between treated vs control following the DESeq2 vignette. I have no other meta information about this dataset, therefore my colData only contains a single column describing which sample is treated and which is control. My design matrix is (design = ~ condition).
When I perform DEseq2 on this object, the results look fine, but when I try to use the resultsName function on the dds object, nothing is returned (character 0). May I ask if I am doing this correctly?