Copy Number Analysis of Multiple Cohorts Using CNVkit
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7 months ago
weisong • 0

Hi everyone,

I am currently interested in performing combined analysis on WGS (Whole Genome Sequencing) data from four different cohorts. Some samples in these cohorts lack matched normal controls. I would like to inquire whether it is possible to create a pooled reference using normal samples from different cohorts and then proceed with copy number analysis.

Thank you for your assistance.

CNVkit • 325 views
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Entering edit mode
7 months ago
rbioinfo ▴ 40

How about a human pangenome reference?

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