Normalisation of PLINK/VCF files?
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Entering edit mode
8 months ago

Variant notations can vary significantly, and although there are numerous tools available to address this issue, such as bcftools +fixref or bcftools norm, there's still a chance that something might be overlooked. Is there a comprehensive tool or pipeline that automates this process to ensure a safe merge of any PLINK files with small variants?

Thank you!

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