What is Total_DP in gnomAD Coverage File
0
0
Entering edit mode
22 months ago
Lisa392 • 0

Given the downloadable file for coverage in gnomAD, what do values in the total_DP column represent? I understand it refers to depth, but is this referring to the number of reads across a certain number of samples, or number of individuals sampled? For example, if a nucleotide position is sequenced for 100 samples, perhaps 30 times across 100 samples, would DP be 30 or 100? Also, would there be a way to identify the number of samples sequenced for a given nucleotide position if it is the former.

depth coverage gnomad • 430 views
ADD COMMENT

Login before adding your answer.

Traffic: 3235 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6