Any tools for finding the telomere sequences / lengths directly for nanopore sequencing reads without any prior knowledge of the organism
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3 months ago
Mark • 0

I'm doing a bunch of genome assemblies on rare eukaryotic organisms. One of the ways I want to estimate the completeness of my assemblies is by running them through this program that estimates the number of chromosomes in the eukaryotic organism based on the telomere groupings ( The program needs the telomere repeat sequence as input to work though. Is there a program that can predict this information from raw sequencing reads?

genomics telomeres reads • 960 views

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