Cibersort input data

Question

[Maryam]

Hello everynone. Could you please guide me. I have an expression matrix that I have filtered and normalized it by edgeR and limma packages. Can I use this for cibersort? Or I have to use PFKM or TPM for cibersort?

Answer 1

[Kaia]

They have specify this in their tutorials. Go to their website and click on menu -- tutorial.

[Maryam]

Thanks for your response.