How to Create an HMMER Profile with VFDB Files?
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21 months ago
projetos • 0

How do I create an HMM profile using the files from http://www.mgc.ac.cn/VFs/ to run HMMER? I have the file.faa after running Prodigal and I need to generate a profile with hmmbuild called profile.hmm. This is my first time creating a profile in HMMER and I'm looking for guidance on how to carry out this profile creation process with hmmbuild and VFDB.

hmmer annotation • 1.2k views
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What would be the steps to create an hmmer profile? I can't find it in the documentation

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Please try to understand how to use the forum properly. Read these posts: https://www.biostars.org/tag/how-to/

What was the intention behind you adding this "answer" to your post?

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