Entering edit mode
21 months ago
projetos
•
0
I have many files = file.tblout for several metagenomes and I need to generate a gene abundance table where I have the columns sample ID, gene abundance. And I also need to generate a presence and absence matrix where I have the columns: sample ID, gene1, gene2, etc. Where absence is 0 and presence is 1. How to generate these tables from the tblout results of the hmmer annotation? This is the first time I've done this and I need some guidance.
What have you tried?
I still haven't found any solution. I do not know where to start. Please! Can you help me ?
Have you tried opening a tblout file or viewing its contents? You must have tried something!