Hey guys, I hope you all are doing well, I have a list of full mouse TCR sequences that I got from my vdj scRNA seq experiment, I am just wondering if there is a tool that might help me to predict what these TCR might recognize?
Hi, I hope you are doing great. If you still need help with your problem, maybe this can help. ImmuneWatch has developed a bioinformatics tool called ImmuneWatch DETECT to annotate the epitope specificity of your T-cell receptor sequences. We usually don't work with mouse data but if you have your own mouse TCR-Epitope data, you can use that for the tool. Maybe this could be a solution for you? Disclosure, I am working on the product. immunewatch.com/detect-early-access-program/
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version 2.3.6
Add a Tool type post advertising your tool - please stop resurrecting really old posts with these copy-paste responses, it looks a lot like spamming.