Entering edit mode
11 months ago
jfelix
•
0
Hi! I'm trying to test swDMR (https://github.com/xflicsu/swDMR) in my RRBS-seq data, and I need a bed file input with the following information: chromossome, start, end, element(CDS, 5-UTR, 3-UTR, intron, upstream, downstream), strand, gene name. What would be a good strategy to extract a bed file with these information?
I tested this option, but I can't obtain the gene name information.
Thanks in advance!