Codon Usage Analysis

Question

[jl056933]

Hi all, how can I use CodonW to do codon usage analysis using relative synonymous codon usage (RSCU), codon adaptation index (CAI) and effective number of codons (ENC) for a viral genome?

[Mensur Dlakic]

There are multiple websites with documentation and tutorials. What exactly is unclear in them?

• https://codonw.sourceforge.net/
• https://codonw.sourceforge.net/culong.html
• https://codonw.sourceforge.net/Tutorial.html
• https://codonw.sourceforge.net/Readme.html