SAMstat mapping quality report MAPQ gt vs MAPQ lt
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6 weeks ago
njornet ▴ 20

I'm using SAMstat to compare different sequencing conditions and in the report it categorizes the mapping quality of the reads by MAPQ gt 30, MAPQ lt 30 and MAPQ lt 10. I understand that a quality of MAPQ 30 is an error rate of 0.001, but I can't find what the gt and lt are refering to.

Sequencing mapping samstat • 136 views
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