Entering edit mode
4 months ago
peanut
•
0
Dear all, When i use EVidenceModeler to do the genome annotation,it get the error:
successfully changed directories to acu.partitions/GWHBGBO00000001/GWHBGBO00000001_10890001-10990000
-reading genomic sequence.
** Processing features (+)
-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)-WARNING, skipping predType: Augustus, since not specified in weights file.
-WARNING, skipping predType: Augustus, since not specified in weights file.
-WARNING, skipping predType: Augustus, since not specified in weights file.
-WARNING, skipping predType: Augustus, since not specified in weights file.
-WARNING, skipping predType: Augustus, since not specified in weights file.
-WARNING, skipping predType: Augustus, since not specified in weights file.
-WARNING, skipping predType: GeneMark.hmm3, since not specified in weights file.
-WARNING, skipping predType: GeneMark.hmm3, since not specified in weights file.
-WARNING, skipping predType: GeneMark.hmm3, since not specified in weights file.
-WARNING, skipping predType: GeneMark.hmm3, since not specified in weights file.
-WARNING, skipping predType: GeneMark.hmm3, since not specified in weights file.
and the weights.txt is like that:
PROTEIN gth 4
TRANSCRIPT transdecoder 8
ABINITIO_PREDICTION AUGUSTUS 1
ABINITIO_PREDICTION GeneMark.hmm 1
Can you help me ? Thank you a lot!!
thank you so much ,i get it