Software to separate reads from different individuals

Question

[njornet]

I have a sample of a mixture of DNA from two different individuals (human) and I want to separate the reads sequenced by Nanopore (long reads) from each person. Does it exist a software that can do this or do I have to implement it myself?

Thank you!

[GenoMax]

Were these samples barcoded when they were run. If not then you won't be able to do much.

[njornet]

No... the extracted sample is already a mix so no way to barcode

[GenoMax]

If you have independent information available (e.g. genotype data for both individuals) then you may be able to assign reads based on the presence of SNP.