TFs and Gene databases
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6 weeks ago
ijarne ▴ 10

I have started my involvement in a project where I will be working with NGS data for the generation of regulatory networks. For this, I would need to acquire a database with TFs and their targets.

Can someone provide me with some guides on where to look for this kind of database?

Transcription-factor Target Regulatory-Networks • 444 views
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6 weeks ago

See TFlink, KnockTF2, TFBSDB, and hTFtarget.

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Thank you so much jared.andrews07 it looks like I will be able to get what I intended with these sources !!

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6 weeks ago

I can also suggest https://footprintdb.eead.csic.es which links TFs to their DNA motifs, not their gene targets.

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