Annotating Pathways in a network

Question

[Akash D]

Hi, I want to divide my target node list into respective pathways to which they belong. I have the required information of pathways to which these nodes belong but i do not know how to show it in cytoscape and that is my goal..

please help.

See the image attached

Answer 1

[Scooter]

Hi there,

OK, as I said in my previous reply to you, a given protein can be a member of multiple pathways. You could certainly try annotating your nodes with specific pathways and then doing a grouped layout. Not sure offhand how you would go about doing that mapping, however.

-- scooter