Discover_pseudogenes pipeline - GITHUB
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14 months ago

I have been using this pipeline to discover pseudogene from RNA-seq data of Clarias magur comparing it with protein fasta of Clarias magur assembled genome. I have got some results that some proteins are characterized as pseudogenes with mutations in certain regions of transcriptome and also the genome. What should be done to further characterize if they are actually pseudogenes?

Pseudogene-mining pseudogenes Transcribed-pseudogenes • 350 views
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