Seeking Tool for Transcription Factor Motif Enrichment Analysis on RRBS Dataset
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9 months ago
Srinka ▴ 20

Hello Biostars community,

I am currently working with a Reduced Representation Bisulfite Sequencing (RRBS) dataset and need to perform transcription factor motif enrichment analysis. While I have come across tools like HOMER, which are often recommended for ChIP-seq data, I am unsure if they are suitable for RRBS data.

Could anyone recommend an appropriate tool or pipeline specifically tailored for motif enrichment analysis in RRBS datasets?

RRBS Epigenetics Transcription-Factors DNA-Methylation Motif-Enrichment • 501 views
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